STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2310Regulatory protein MarR; KEGG: cpy:Cphy_1696 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (164 aa)    
Predicted Functional Partners:
Cpap_2311
KEGG: cpy:Cphy_1697 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA.
 
     0.845
Cpap_2313
Manually curated; TIGRFAM: arsenite-activated ATPase ArsA; KEGG: cpy:Cphy_1698 arsenite-transporting ATPase.
 
     0.814
Cpap_2308
PFAM: protein of unknown function DUF214; KEGG: bcz:pE33L466_0065 ABC transporter permease.
 
     0.647
Cpap_0303
KEGG: cce:Ccel_2991 hypothetical protein.
  
     0.614
Cpap_1297
PFAM: protein of unknown function DUF955; KEGG: drm:Dred_0494 hypothetical protein.
  
    0.581
Cpap_2312
Hypothetical protein; KEGG: sun:SUN_2225 NADH-quinone oxidoreductase, chain G.
       0.573
Cpap_2307
PFAM: major facilitator superfamily MFS_1; KEGG: bcz:pE33L466_0066 macrolide-efflux protein.
 
   
 0.555
Cpap_4093
KEGG: cce:Ccel_2345 hypothetical protein.
  
     0.523
Cpap_2110
KEGG: cce:Ccel_0029 hypothetical protein.
  
     0.520
Cpap_4092
KEGG: cpy:Cphy_2164 hypothetical protein.
  
 
   0.517
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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