STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2313Manually curated; TIGRFAM: arsenite-activated ATPase ArsA; KEGG: cpy:Cphy_1698 arsenite-transporting ATPase. (386 aa)    
Predicted Functional Partners:
Cpap_0705
KEGG: cce:Ccel_2116 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.835
Cpap_1999
KEGG: cce:Ccel_0327 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.835
Cpap_2310
Regulatory protein MarR; KEGG: cpy:Cphy_1696 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
 
     0.814
Cpap_2105
KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
 
 
 0.778
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.773
Cpap_2312
Hypothetical protein; KEGG: sun:SUN_2225 NADH-quinone oxidoreductase, chain G.
       0.757
Cpap_2311
KEGG: cpy:Cphy_1697 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA.
 
   
0.741
Cpap_1088
KEGG: cce:Ccel_0492 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
 
 0.722
pyrF
TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: cce:Ccel_0614 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
   
 
 0.700
Cpap_2314
KEGG: cce:Ccel_0213 hypothetical protein.
       0.642
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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