STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2316PFAM: glycoside hydrolase family 76; KEGG: cce:Ccel_0215 protein of unknown function DUF255. (672 aa)    
Predicted Functional Partners:
Cpap_0945
PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family.
   
 0.852
Cpap_3849
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.852
Cpap_2846
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0840 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.643
Cpap_0261
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0740 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.634
Cpap_0986
Cellulase; KEGG: cce:Ccel_0428 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; S-layer domain-containing protein.
   
  0.634
Cpap_4100
PFAM: glycoside hydrolase family 5; KEGG: cce:Ccel_2337 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.634
Cpap_3235
KEGG: sus:Acid_6525 hypothetical protein.
   
  0.627
Cpap_2317
KEGG: fjo:Fjoh_5041 GCN5-related N-acetyltransferase.
       0.496
Cpap_3275
PFAM: Dockerin type 1; leucine-rich repeat-containing protein; KEGG: ctc:CTC00495 internalin A-like protein/putative S-layer protein.
  
 
   0.407
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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