STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2343Ig-like, group 2; KEGG: cce:Ccel_3406 Ig-like, group 2. (952 aa)    
Predicted Functional Partners:
Cpap_1961
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0289 S-layer domain protein.
  
     0.768
Cpap_0341
KEGG: cce:Ccel_2923 hypothetical protein.
 
     0.762
Cpap_1960
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0288 hypothetical protein.
  
     0.728
Cpap_1574
KEGG: cce:Ccel_0595 hypothetical protein.
  
     0.723
Cpap_3893
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_1126 copper amine oxidase domain protein.
  
     0.705
Cpap_1538
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_1655 hypothetical protein.
  
     0.686
Cpap_2356
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_3397 S-layer domain protein.
 
     0.685
Cpap_4000
PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein.
  
     0.683
Cpap_0448
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_0075 anion ABC transporter, anion-binding protein.
  
     0.682
Cpap_1137
KEGG: cce:Ccel_2334 copper amine oxidase domain protein; manually curated; PFAM: copper amine oxidase-like domain-containing protein.
  
     0.669
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.