STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2417KEGG: cce:Ccel_3339 hypothetical protein. (274 aa)    
Predicted Functional Partners:
Cpap_1664
PFAM: regulatory protein DeoR; KEGG: cce:Ccel_0680 fatty acid biosynthesis transcriptional regulator.
  
   
 0.763
Cpap_2418
PFAM: Osmosensitive K channel His kinase sensor; KEGG: tpd:Teth39_0496 osmosensitive K+ channel histidine kinase sensor subunit.
       0.732
Cpap_2416
KEGG: cce:Ccel_3340 sporulation protein YtxC; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC.
 
     0.622
Cpap_2990
PFAM: Sporulation stage III protein AF; KEGG: cce:Ccel_1911 hypothetical protein.
 
    0.608
Cpap_2995
PFAM: Protein of unknown function DUF2273; KEGG: cce:Ccel_1906 hypothetical protein.
 
     0.580
Cpap_0406
KEGG: cce:Ccel_0532 hypothetical protein.
  
     0.516
Cpap_3658
KEGG: cce:Ccel_1461 hypothetical protein.
  
     0.505
Cpap_1951
PFAM: protein of unknown function DUF1779; KEGG: cce:Ccel_0279 protein of unknown function DUF1779.
  
     0.492
Cpap_2251
KEGG: cce:Ccel_0172 hypothetical protein.
  
     0.446
Cpap_1850
PFAM: protein of unknown function DUF116; KEGG: cce:Ccel_1530 protein of unknown function DUF116.
  
     0.424
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.