STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2426PFAM: cobalt transport protein; KEGG: eel:EUBELI_00330 cobalt/nickel transport system permease protein. (267 aa)    
Predicted Functional Partners:
ecfA-4
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.994
ecfA-3
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.993
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.980
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.980
Cpap_2466
PFAM: BioY protein; KEGG: cce:Ccel_3231 BioY protein.
 
 0.930
Cpap_3365
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.868
Cpap_3087
ABC transporter related protein; KEGG: shi:Shel_12820 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.853
Cpap_3088
ABC transporter related protein; KEGG: shi:Shel_12810 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.843
Cpap_3476
KEGG: ckr:CKR_2208 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.841
Cpap_3650
KEGG: cce:Ccel_1453 protein of unknown function DUF1393.
 
 
 0.828
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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