STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2460KEGG: cth:Cthe_2564 hypothetical protein. (226 aa)    
Predicted Functional Partners:
Cpap_1871
KEGG: cbe:Cbei_3550 hypothetical protein.
  
     0.673
Cpap_3184
KEGG: cce:Ccel_1716 hypothetical protein.
  
     0.566
Cpap_0599
KEGG: cce:Ccel_2014 hypothetical protein.
  
     0.565
Cpap_0026
KEGG: cce:Ccel_0511 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
  
     0.506
Cpap_2459
KEGG: ava:Ava_1621 hypothetical protein.
       0.503
Cpap_1231
Xylan 1,4-beta-xylosidase; KEGG: cce:Ccel_1011 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.475
Cpap_1618
KEGG: ere:EUBREC_3043 hypothetical protein.
  
     0.462
Cpap_4038
PFAM: GCN5-related N-acetyltransferase; KEGG: ere:EUBREC_0648 hypothetical protein.
  
     0.441
Cpap_0996
PFAM: Abortive infection protein; KEGG: cpy:Cphy_0673 abortive infection protein.
  
     0.439
Cpap_1788
Mannan endo-1,4-beta-mannosidase; KEGG: cce:Ccel_1551 glycoside hydrolase family 26; PFAM: Dockerin type 1; Belongs to the glycosyl hydrolase 26 family.
  
     0.439
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.