Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cpap_2516 | Cpap_2517 | Cpap_2516 | Cpap_2517 | PFAM: aminotransferase class I and II; KEGG: cce:Ccel_3185 aminotransferase class I and II. | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | 0.639 |
Cpap_2517 | Cpap_2516 | Cpap_2517 | Cpap_2516 | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | PFAM: aminotransferase class I and II; KEGG: cce:Ccel_3185 aminotransferase class I and II. | 0.639 |
Cpap_2517 | Cpap_2518 | Cpap_2517 | Cpap_2518 | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | TIGRFAM: seryl-tRNA synthetase; KEGG: cce:Ccel_3183 seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase, class IIa-like; tRNA synthetase class II (G H P and S). | 0.437 |
Cpap_2517 | lysS | Cpap_2517 | Cpap_2065 | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | KEGG: cce:Ccel_0396 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.904 |
Cpap_2518 | Cpap_2517 | Cpap_2518 | Cpap_2517 | TIGRFAM: seryl-tRNA synthetase; KEGG: cce:Ccel_3183 seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase, class IIa-like; tRNA synthetase class II (G H P and S). | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | 0.437 |
Cpap_2518 | lysS | Cpap_2518 | Cpap_2065 | TIGRFAM: seryl-tRNA synthetase; KEGG: cce:Ccel_3183 seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase, class IIa-like; tRNA synthetase class II (G H P and S). | KEGG: cce:Ccel_0396 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.737 |
lysS | Cpap_2517 | Cpap_2065 | Cpap_2517 | KEGG: cce:Ccel_0396 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family. | KEGG: cce:Ccel_3184 metal dependent phophohydrolase. | 0.904 |
lysS | Cpap_2518 | Cpap_2065 | Cpap_2518 | KEGG: cce:Ccel_0396 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family. | TIGRFAM: seryl-tRNA synthetase; KEGG: cce:Ccel_3183 seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase, class IIa-like; tRNA synthetase class II (G H P and S). | 0.737 |