STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2553KEGG: cce:Ccel_3086 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. (264 aa)    
Predicted Functional Partners:
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.843
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.837
Cpap_3631
SMART: AAA ATPase; KEGG: cce:Ccel_1435 AAA ATPase.
    
  0.833
Cpap_1903
Inorganic diphosphatase; PFAM: DHHA2 domain protein; DRTGG domain protein; CBS domain containing protein; phosphoesterase RecJ domain protein; KEGG: cce:Ccel_0248 putative manganese-dependent inorganic pyrophosphatase; SMART: CBS domain containing protein.
    
  0.825
Cpap_2555
KEGG: cce:Ccel_3084 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.814
Cpap_1296
Cold-shock protein DNA-binding; KEGG: tet:TTHERM_00518520 TPR Domain containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; Tetratricopeptide repeat.
 
  
  0.775
Cpap_3022
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cce:Ccel_1885 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein.
    
  0.752
Cpap_2626
PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: cce:Ccel_2519 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.
    
  0.737
Cpap_3341
PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: cce:Ccel_2519 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.
    
  0.737
Cpap_3374
KEGG: cce:Ccel_1278 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrinogen III synthase HEM4; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
    
  0.731
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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