STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2558PFAM: Septum formation initiator; KEGG: cce:Ccel_3081 septum formation initiator. (92 aa)    
Predicted Functional Partners:
Cpap_0655
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.944
Cpap_1072
KEGG: cce:Ccel_0477 cell division protein FtsL.
    
 
 0.931
Cpap_2556
KEGG: cce:Ccel_3083 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
  
  
 0.738
Cpap_2559
PFAM: RNA binding S1 domain protein; KEGG: cce:Ccel_3080 RNA binding S1 domain protein.
  
  
 0.723
Cpap_2557
PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: cce:Ccel_3082 hypothetical protein.
  
    0.717
Cpap_2555
KEGG: cce:Ccel_3084 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.568
Cpap_1073
KEGG: cce:Ccel_0478 penicillin-binding protein transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; SMART: PASTA domain containing protein.
  
 
 0.493
Cpap_1718
KEGG: cce:Ccel_1637 hypothetical protein.
  
  
 0.492
Cpap_2553
KEGG: cce:Ccel_3086 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase.
       0.488
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.