Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cpap_2649 | Cpap_2650 | Cpap_2649 | Cpap_2650 | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | KEGG: clj:CLJU_c36060 hypothetical protein. | 0.463 |
Cpap_2649 | Cpap_3257 | Cpap_2649 | Cpap_3257 | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | KEGG: cpr:CPR_1329 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.411 |
Cpap_2649 | nadA | Cpap_2649 | Cpap_1441 | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.426 |
Cpap_2650 | Cpap_2649 | Cpap_2650 | Cpap_2649 | KEGG: clj:CLJU_c36060 hypothetical protein. | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | 0.463 |
Cpap_3257 | Cpap_2649 | Cpap_3257 | Cpap_2649 | KEGG: cpr:CPR_1329 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | 0.411 |
nadA | Cpap_2649 | Cpap_1441 | Cpap_2649 | Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | PFAM: metallophosphoesterase; KEGG: cce:Ccel_2542 metallophosphoesterase. | 0.426 |