STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2694KEGG: cce:Ccel_2508 hypothetical protein. (520 aa)    
Predicted Functional Partners:
Cpap_2695
PFAM: glycosyl transferase family 8; KEGG: bld:BLi04064 GspA.
       0.773
Cpap_3401
PFAM: glycoside hydrolase family 8; Dockerin type 1; KEGG: cce:Ccel_1298 glycoside hydrolase family 8.
    
 0.692
Cpap_2693
PFAM: AMP-dependent synthetase and ligase; KEGG: mes:Meso_2882 AMP-dependent synthetase and ligase.
       0.671
Cpap_2692
PFAM: phosphopantetheine-binding; KEGG: tye:THEYE_A0102 acyl carrier protein.
       0.621
Cpap_2696
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: csc:Csac_1510 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
       0.620
Cpap_0945
PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family.
    
 0.609
Cpap_3849
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.609
Cpap_2691
PFAM: AMP-dependent synthetase and ligase; KEGG: neu:NE0796 capsular polysaccharide biosynthesis protein CapK.
       0.563
Cpap_2697
PFAM: glycosyl transferase family 2; KEGG: pay:PAU_02127 putative beta1,3-glucosyltransferase.
       0.553
Cpap_2688
Hypothetical protein; KEGG: tgu:100232017 zinc finger, MYND domain containing 11.
    
 
0.529
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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