STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2767Protein of unknown function DUF214; KEGG: sak:SAK_0172 permease, putative; manually curated; PFAM: protein of unknown function DUF214. (362 aa)    
Predicted Functional Partners:
Cpap_2766
KEGG: lwe:lwe2530 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.945
Cpap_2765
KEGG: ant:Arnit_2038 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein.
       0.768
Cpap_2764
Integral membrane sensor signal transduction histidine kinase; Manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ant:Arnit_2039 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
  
 
 0.767
Cpap_3422
KEGG: dhd:Dhaf_3722 ABC transporter related; PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase.
 
 0.752
Cpap_1882
KEGG: cce:Ccel_0227 hypothetical protein.
   
 
 0.599
Cpap_1061
KEGG: cce:Ccel_0466 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.577
Cpap_2309
KEGG: bcz:pE33L466_0064 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.577
Cpap_2495
KEGG: ckr:CKR_0343 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.577
Cpap_3580
KEGG: csc:Csac_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.577
Cpap_3709
KEGG: cce:Ccel_0855 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.577
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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