STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2796Hypothetical protein; KEGG: lki:LKI_03570 transcriptional regulator. (226 aa)    
Predicted Functional Partners:
acpS-2
Holo-acyl-carrier-protein synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.773
Cpap_2790
PFAM: major facilitator superfamily MFS_1; KEGG: dap:Dacet_1066 major facilitator superfamily MFS_1.
 
     0.758
Cpap_2795
KEGG: shi:Shel_11190 putative hydrolase, CocE/NonD family; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein.
 
     0.741
Cpap_3407
KEGG: cce:Ccel_1302 putative transcriptional regulator, TetR family.
  
     0.548
Cpap_2813
Succinate dehydrogenase; KEGG: clj:CLJU_c08670 putative reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
     0.538
Cpap_4069
PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcg:BCG9842_B1853 transporter, EamA family.
  
     0.481
Cpap_2787
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: clj:CLJU_c38590 enoate reductase.
 
  
 0.467
Cpap_2794
KEGG: shi:Shel_11200 hypothetical protein.
       0.460
Cpap_1122
PFAM: regulatory protein TetR; KEGG: bpo:BP951000_1357 regulatory protein, TetR family.
  
     0.450
Cpap_0281
Hypothetical protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase.
    
 0.448
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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