STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2801PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: rcu:RCOM_0276330 hypothetical protein. (319 aa)    
Predicted Functional Partners:
Cpap_2800
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: rcu:RCOM_0276330 hypothetical protein.
 
  
 
0.933
Cpap_2798
PFAM: oxidoreductase domain protein; KEGG: pmo:Pmob_0727 oxidoreductase domain-containing protein.
  
 
 0.846
Cpap_2799
PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: plm:Plim_3264 xylose isomerase domain protein TIM barrel.
       0.716
Cpap_1210
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: csc:Csac_0599 oxidoreductase domain-containing protein.
   
 
 0.581
Cpap_1211
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gym:GYMC10_1210 oxidoreductase domain protein.
   
 
 0.581
Cpap_1216
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ach:Achl_0779 oxidoreductase domain protein.
   
 
 0.581
Cpap_3791
PFAM: oxidoreductase domain protein; KEGG: tit:Thit_1751 oxidoreductase domain protein.
   
 
 0.581
Cpap_3892
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cce:Ccel_1125 oxidoreductase domain protein.
   
 
 0.581
Cpap_2802
PFAM: ROK family protein; KEGG: cbt:CLH_2695 ROK family protein.
 
  
  0.551
rbsK
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.441
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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