STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2842PFAM: carbonic anhydrase; KEGG: cce:Ccel_0844 hypothetical protein. (181 aa)    
Predicted Functional Partners:
Cpap_0409
KEGG: cce:Ccel_0535 transferase hexapeptide repeat containing protein.
    
 0.944
Cpap_1804
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpu:BPUM_0635 acyl-CoA dehydrogenase (NADP(+)).
     
 0.595
Cpap_2922
KEGG: cce:Ccel_1970 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.591
Cpap_2544
Purine operon repressor, PurR; KEGG: cce:Ccel_3095 pur operon repressor; TIGRFAM: pur operon repressor; PFAM: purine repressor; phosphoribosyltransferase.
   
    0.571
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.571
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.571
Cpap_0275
KEGG: amt:Amet_4595 membrane protein.
  
     0.544
Cpap_4019
KEGG: cce:Ccel_1970 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.519
Cpap_4020
Manually curated; TIGRFAM: germination protein, Ger(x)C family; KEGG: cce:Ccel_1969 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.510
Cpap_2923
KEGG: cce:Ccel_1969 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.505
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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