STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2916KEGG: cce:Ccel_1974 hypothetical protein. (294 aa)    
Predicted Functional Partners:
Cpap_2062
KEGG: cce:Ccel_0393 hypothetical protein.
  
     0.700
Cpap_0704
PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_2115 extracellular solute-binding protein family 1.
 
    0.600
Cpap_3337
Transcriptional regulator, LuxR family; KEGG: tex:Teth514_0348 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
    0.583
Cpap_2630
KEGG: cce:Ccel_2523 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
    0.559
Cpap_0786
PFAM: major facilitator superfamily MFS_1; KEGG: cce:Ccel_2443 major facilitator superfamily MFS_1.
  
     0.521
Cpap_1970
KEGG: cce:Ccel_0298 hypothetical protein.
 
     0.516
Cpap_3550
PFAM: major facilitator superfamily MFS_1; KEGG: cce:Ccel_2443 major facilitator superfamily MFS_1.
  
     0.508
Cpap_0702
KEGG: cce:Ccel_2113 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain.
 
    0.495
Cpap_0677
PFAM: major facilitator superfamily MFS_1; KEGG: cce:Ccel_2087 major facilitator superfamily MFS_1.
  
     0.484
Cpap_2479
PFAM: Collagen triple helix repeat-containing protein; KEGG: bli:BL03072 hypothetical protein.
  
    0.484
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.