STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2964PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_1937 copper amine oxidase domain protein. (646 aa)    
Predicted Functional Partners:
Cpap_0079
Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: bsu:BSU17200 polyketide synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; Methyltransferase type 12.
    
 0.839
Cpap_3272
PFAM: KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding; KEGG: bbe:BBR47_39890 putative polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, dehydratase domain.
    
 0.839
Cpap_3713
PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region.
    
 0.839
Cpap_2954
PFAM: Domain of unknown function DUF3298; copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_1942 copper amine oxidase domain protein.
 
 
  0.836
Cpap_2059
KEGG: cce:Ccel_0390 hypothetical protein.
  
 
 0.801
Cpap_2105
KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
  
 
 0.797
Cpap_1929
KEGG: bcg:BCG9842_B3621 hypothetical protein.
  
    0.774
Cpap_3348
KEGG: cce:Ccel_2515 hypothetical protein.
  
     0.773
Cpap_0250
PFAM: cellulosome anchoring protein cohesin region; type 3a cellulose-binding domain protein; protein of unknown function DUF291; KEGG: cce:Ccel_0728 cellulosome anchoring protein cohesin region.
  
     0.772
Cpap_2622
KEGG: cce:Ccel_2515 hypothetical protein.
  
     0.772
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.