STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3081PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_1813 glycosyl transferase family 2. (269 aa)    
Predicted Functional Partners:
Cpap_3078
PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_1816 glycosyl transferase family 2.
 
 
 0.834
Cpap_3083
PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_1811 glycosyl transferase family 2.
 
     0.809
Cpap_3080
PFAM: aminotransferase class-III; KEGG: cce:Ccel_1814 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.664
Cpap_3079
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cce:Ccel_1815 NAD-dependent epimerase/dehydratase.
  
 
 0.634
Cpap_3082
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cce:Ccel_1812 endonuclease/exonuclease/phosphatase.
     
 0.631
Cpap_3077
PFAM: polysaccharide biosynthesis protein; KEGG: cce:Ccel_1817 polysaccharide biosynthesis protein.
  
  
 0.529
Cpap_4106
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding; KEGG: cce:Ccel_2331 amino acid adenylation domain protein; SMART: Polyketide synthase/Fatty acid synthase, KR.
  
 0.506
Cpap_3816
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 
 0.504
Cpap_3817
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cce:Ccel_1091 NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.503
Cpap_2017
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; KEGG: cce:Ccel_0348 nucleotidyl transferase.
  
 0.499
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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