STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3093PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cce:Ccel_1803 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region. (196 aa)    
Predicted Functional Partners:
cmk
KEGG: cce:Ccel_1729 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
     
 0.833
deoD
KEGG: cce:Ccel_3381 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1.
     
 0.832
Cpap_1557
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.831
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.831
Cpap_2256
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
    
  0.831
Cpap_3786
PFAM: purine or other phosphorylase family 1; KEGG: cce:Ccel_1081 purine or other phosphorylase family 1.
     
 0.817
Cpap_3092
Metal-dependent phosphohydrolase HD sub domain; KEGG: cce:Ccel_1804 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily.
  
    0.784
Cpap_3944
PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: cce:Ccel_1174 metallophosphoesterase; Belongs to the 5'-nucleotidase family.
     
 0.742
tmk-2
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.739
Cpap_2626
PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: cce:Ccel_2519 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.
    
 0.720
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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