STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3122PFAM: amine oxidase; KEGG: cce:Ccel_1778 amine oxidase. (570 aa)    
Predicted Functional Partners:
Cpap_0195
SNF2-related protein; KEGG: npu:Npun_F6355 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
   
 0.942
Cpap_0426
SNF2-related protein; KEGG: tpd:Teth39_0928 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase.
    
 0.927
Cpap_1417
KEGG: cce:Ccel_3458 SNF2-related protein; PFAM: SNF2 helicase associated domain protein; helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; PMZ-type Zinc finger domain protein.
    
 0.927
Cpap_0775
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cce:Ccel_2448 FAD dependent oxidoreductase.
  
 
 0.908
Cpap_0394
PFAM: phosphoesterase PA-phosphatase related; KEGG: cce:Ccel_2878 hypothetical protein.
  
 
 0.876
Cpap_3718
KEGG: bbe:BBR47_39880 putative polyketide synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
  
 
 0.788
Cpap_2348
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cpe:CPE2531 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.775
Cpap_2505
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cce:Ccel_3198 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.775
Cpap_3690
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tde:TDE1367 glyoxalase family protein.
     
 0.747
Cpap_0961
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbt:CLH_2446 glyoxalase family protein.
     
 0.734
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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