STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcALProtein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (416 aa)    
Predicted Functional Partners:
Cpap_2241
PFAM: Methyltransferase type 11; KEGG: cce:Ccel_0162 methyltransferase type 11; Belongs to the methyltransferase superfamily.
  
     0.737
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.645
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.547
Cpap_0321
PFAM: Methyltransferase type 11; KEGG: cbl:CLK_0307 methyltransferase.
  
    0.507
Cpap_0938
KEGG: cce:Ccel_2170 SAM dependent methyltransferase.
  
    0.507
Cpap_0977
Methyltransferase type 12; KEGG: cdf:CD1759 hypothetical protein; manually curated; PFAM: Methyltransferase type 12.
  
    0.507
Cpap_3916
PFAM: Methyltransferase type 11; KEGG: cce:Ccel_1149 methyltransferase type 11.
  
    0.507
Cpap_3520
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cce:Ccel_1364 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.503
Cpap_2426
PFAM: cobalt transport protein; KEGG: eel:EUBELI_00330 cobalt/nickel transport system permease protein.
  
     0.499
Cpap_2151
Phosphoesterase RecJ domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
     0.469
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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