STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3181KEGG: cce:Ccel_1719 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein. (374 aa)    
Predicted Functional Partners:
Cpap_0079
Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: bsu:BSU17200 polyketide synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; Methyltransferase type 12.
    
 0.839
Cpap_3272
PFAM: KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding; KEGG: bbe:BBR47_39890 putative polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, dehydratase domain.
    
 0.839
Cpap_3713
PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region.
    
 0.839
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.754
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.754
Cpap_0775
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cce:Ccel_2448 FAD dependent oxidoreductase.
  
 0.737
Cpap_1804
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpu:BPUM_0635 acyl-CoA dehydrogenase (NADP(+)).
    
  0.736
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.729
Cpap_2105
KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
    
 0.707
Cpap_2258
PFAM: NUDIX hydrolase; KEGG: cce:Ccel_0179 NUDIX hydrolase.
    
 0.701
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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