Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3205PFAM: thioesterase superfamily protein; KEGG: cce:Ccel_1701 thioesterase superfamily protein. (142 aa)    
Predicted Functional Partners:
Cpap_1119
PFAM: Amidase; KEGG: cce:Ccel_2653 amidase.
     
  0.900
Cpap_3144
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   
 0.745
Cpap_3578
Phenylacetate--CoA ligase; KEGG: cce:Ccel_1392 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase.
 
   
 0.744
Cpap_1653
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   
 0.739
Cpap_1380
KEGG: cth:Cthe_2792 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase.
 
   
 0.723
Cpap_3242
KEGG: cby:CLM_0374 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.604
Cpap_0281
Hypothetical protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase.
  
 
 0.576
Cpap_4106
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding; KEGG: cce:Ccel_2331 amino acid adenylation domain protein; SMART: Polyketide synthase/Fatty acid synthase, KR.
  
 
 0.548
Cpap_3206
PFAM: GCN5-related N-acetyltransferase; KEGG: cce:Ccel_1700 GCN5-related N-acetyltransferase.
       0.524
Cpap_1009
PFAM: AMP-dependent synthetase and ligase; KEGG: ckr:CKR_1607 hypothetical protein.
  
 
 0.503
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.