STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3218PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cce:Ccel_1688 NADH/ubiquinone/plastoquinone (complex I). (495 aa)    
Predicted Functional Partners:
Cpap_3219
KEGG: cce:Ccel_1687 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit.
 
 0.999
Cpap_3220
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cce:Ccel_1686 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 0.999
Cpap_3216
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: cce:Ccel_1690 respiratory-chain NADH dehydrogenase, subunit 1.
 
 0.995
Cpap_2384
PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: cce:Ccel_3371 NADH/ubiquinone/plastoquinone (complex I).
 
0.981
Cpap_3217
KEGG: cce:Ccel_1689 hydrogenase, membrane subunit 2-like protein.
 
  
 0.976
Cpap_2386
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cce:Ccel_3369 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 
 0.968
Cpap_2388
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; nickel-dependent hydrogenase large subunit; KEGG: cce:Ccel_3367 NADH-ubiquinone oxidoreductase chain 49kDa; Belongs to the complex I 49 kDa subunit family.
 
 
 0.963
Cpap_2389
KEGG: cce:Ccel_3366 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.893
Cpap_2812
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: clj:CLJU_c30260 putative oxidoreductase.
  
 0.887
Cpap_0755
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; iron hydrogenase small subunit; ferredoxin; KEGG: cce:Ccel_2467 hydrogenase, Fe-only; SMART: iron hydrogenase small subunit.
  
 0.864
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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