STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3264PFAM: SNARE associated Golgi protein; KEGG: csc:Csac_1457 hypothetical protein. (225 aa)    
Predicted Functional Partners:
Cpap_1764
PFAM: Methyltransferase type 12; oxidoreductase domain protein; KEGG: slg:SLGD_01928 polyketide synthase.
    
 0.701
Cpap_3265
KEGG: cgr:CAGL0H09350g hypothetical protein.
       0.645
Cpap_3263
KEGG: ele:Elen_2186 hypothetical protein.
  
    0.622
Cpap_3421
KEGG: cce:Ccel_1316 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
    
 0.595
Cpap_3259
PFAM: AMP-dependent synthetase and ligase; KEGG: eel:EUBELI_00114 hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
  0.593
Cpap_3261
KEGG: eel:EUBELI_00116 hypothetical protein.
       0.565
Cpap_3262
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: ele:Elen_2185 membrane bound O-acyl transferase MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
       0.565
Cpap_1561
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
    
  0.533
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.532
Cpap_3257
KEGG: cpr:CPR_1329 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.525
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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