STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3323PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_1249 glycoside hydrolase family 9. (686 aa)    
Predicted Functional Partners:
Cpap_3849
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.901
Cpap_0945
PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family.
  
 0.884
Cpap_0261
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0740 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
0.783
Cpap_2048
PFAM: coagulation factor 5/8 type domain protein; protein of unknown function DUF291; Dockerin type 1; glycoside hydrolase family 5; KEGG: cce:Ccel_0379 protein of unknown function DUF291.
  
  
  0.769
Cpap_3068
Type 3a cellulose-binding domain protein; KEGG: cpy:Cphy_2128 mannan endo-1,4-beta-mannosidase; manually curated; PFAM: type 3a cellulose-binding domain protein.
 
 
   0.769
Cpap_2043
TIGRFAM: beta-galactosidase; KEGG: cce:Ccel_0374 beta-galactosidase; PFAM: glycoside hydrolase family 1.
     
 0.747
Cpap_0769
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cce:Ccel_2454 glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
  
  
  0.739
Cpap_4100
PFAM: glycoside hydrolase family 5; KEGG: cce:Ccel_2337 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
0.738
Cpap_0986
Cellulase; KEGG: cce:Ccel_0428 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; S-layer domain-containing protein.
  
 0.734
Cpap_0698
PFAM: glycosyltransferase 36; carbohydrate binding; glycosyltransferase 36 associated; KEGG: cce:Ccel_2109 glycosyltransferase 36.
     
 0.720
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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