node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplD | Cpap_1981 | Cpap_1367 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.999 |
rplA | rplM | Cpap_1981 | Cpap_1332 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplA | rplS | Cpap_1981 | Cpap_0235 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.998 |
rplA | rplT | Cpap_1981 | Cpap_3418 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplA | rplU | Cpap_1981 | Cpap_3426 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplA | rpmI | Cpap_1981 | Cpap_3417 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | KEGG: cce:Ccel_1312 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.994 |
rplA | rpsB | Cpap_1981 | Cpap_1037 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S2; KEGG: cce:Ccel_0442 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rplA | rpsC | Cpap_1981 | Cpap_1362 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.997 |
rplA | rpsI | Cpap_1981 | Cpap_1331 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S9; KEGG: cce:Ccel_0795 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
rplA | rpsR | Cpap_1981 | Cpap_2144 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.996 |
rplD | rplA | Cpap_1367 | Cpap_1981 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
rplD | rplM | Cpap_1367 | Cpap_1332 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplD | rplS | Cpap_1367 | Cpap_0235 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
rplD | rplT | Cpap_1367 | Cpap_3418 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplD | rplU | Cpap_1367 | Cpap_3426 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplD | rpmI | Cpap_1367 | Cpap_3417 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | KEGG: cce:Ccel_1312 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.994 |
rplD | rpsB | Cpap_1367 | Cpap_1037 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein S2; KEGG: cce:Ccel_0442 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsC | Cpap_1367 | Cpap_1362 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsI | Cpap_1367 | Cpap_1331 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | PFAM: ribosomal protein S9; KEGG: cce:Ccel_0795 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplD | rpsR | Cpap_1367 | Cpap_2144 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.995 |