STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3442KEGG: cce:Ccel_1336 hypothetical protein. (106 aa)    
Predicted Functional Partners:
Cpap_3443
KEGG: cce:Ccel_1337 hypothetical protein.
       0.733
Cpap_3444
KEGG: cce:Ccel_1338 protein serine/threonine phosphatase; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; protein phosphatase 2C domain protein.
 
     0.525
Cpap_3441
KEGG: cce:Ccel_1335 hypothetical protein.
       0.495
Cpap_0868
PFAM: Two component regulator three Y domain-containing protein; KEGG: cce:Ccel_2632 hypothetical protein.
  
     0.468
Cpap_0575
PFAM: Two component regulator three Y domain-containing protein; KEGG: cce:Ccel_2632 hypothetical protein.
  
     0.453
Cpap_1868
KEGG: cth:Cthe_1445 uncharacterized Zn-finger protein.
  
     0.431
Cpap_3917
Helix-turn-helix domain protein; KEGG: cce:Ccel_1150 XRE family plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.425
Cpap_2433
PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3040 major facilitator superfamily MFS_1.
  
     0.405
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.