STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3503Beta-galactosidase; KEGG: esi:Exig_0375 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (667 aa)    
Predicted Functional Partners:
Cpap_3556
Alpha-galactosidase; Manually curated; KEGG: lrl:LC705_02697 family 36 glycoside hydrolase; PFAM: glycoside hydrolase clan GH-D.
 
  
 0.870
Cpap_2233
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: cce:Ccel_0154 glycoside hydrolase family 2 TIM barrel.
 
 
 0.864
Cpap_3651
KEGG: cce:Ccel_1454 hypothetical protein.
   
 0.863
Cpap_1381
PFAM: glycoside hydrolase family 4; KEGG: cce:Ccel_3426 glycoside hydrolase family 4.
 
  
  0.778
Cpap_2266
PFAM: glycoside hydrolase clan GH-D; KEGG: pjd:Pjdr2_3562 hypothetical protein.
 
 
 0.745
Cpap_3627
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.744
Cpap_1178
PFAM: glycoside hydrolase family 4; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase.
 
  
  0.714
Cpap_0768
PFAM: glycoside hydrolase family 31; KEGG: cce:Ccel_2455 alpha-xylosidase YicI; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.711
Cpap_3309
Alpha-galactosidase; PFAM: Carbohydrate binding family 6; glycoside hydrolase clan GH-D; Dockerin type 1; KEGG: cce:Ccel_1237 carbohydrate binding family 6; SMART: cellulose binding type IV.
    
 0.694
Cpap_2145
PFAM: glycoside hydrolase family 31; KEGG: cbe:Cbei_2891 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.530
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.