STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3517KEGG: cce:Ccel_1361 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein. (289 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.996
Cpap_3518
KEGG: cce:Ccel_1362 hypothetical protein.
 
  
 0.987
Cpap_3058
PFAM: Rhomboid family protein; KEGG: cce:Ccel_1860 rhomboid family protein.
  
 0.964
Cpap_3631
SMART: AAA ATPase; KEGG: cce:Ccel_1435 AAA ATPase.
  
  0.866
Cpap_3541
KEGG: cce:Ccel_1382 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
     
 0.858
Cpap_2105
KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.843
Cpap_1004
PFAM: peptidase M16 domain protein; KEGG: ddf:DEFDS_0496 peptidase M16 family.
  
 0.813
Cpap_1066
PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein.
  
 0.813
Cpap_1067
PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein.
  
 0.813
Cpap_3200
KEGG: cce:Ccel_1706 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; Belongs to the peptidase M16 family.
  
 0.813
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.