STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3567PFAM: nitrogen regulatory protein P-II; KEGG: cts:Ctha_0406 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (113 aa)    
Predicted Functional Partners:
Cpap_0782
Manually curated; TIGRFAM: ammonium transporter; KEGG: tjr:TherJR_0705 ammonium transporter; PFAM: ammonium transporter.
 
 0.918
Cpap_0800
KEGG: cbe:Cbei_5034 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
 
 0.893
Cpap_1880
PFAM: ammonium transporter; KEGG: aba:Acid345_3596 Rh-like protein/ammonium transporter.
 
 0.867
Cpap_2125
Ammonium transporter; KEGG: eel:EUBELI_00740 guanylate cyclase; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
0.835
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.804
Cpap_1023
KEGG: cce:Ccel_0432 hypothetical protein.
    
 
 0.559
Cpap_1296
Cold-shock protein DNA-binding; KEGG: tet:TTHERM_00518520 TPR Domain containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; Tetratricopeptide repeat.
    
 
 0.559
Cpap_1581
KEGG: cce:Ccel_0602 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
    
 
 0.559
Cpap_2059
KEGG: cce:Ccel_0390 hypothetical protein.
    
 
 0.559
Cpap_2835
KEGG: drm:Dred_2642 hypothetical protein.
    
 
 0.559
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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