STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3710PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_0856 protein of unknown function DUF214. (419 aa)    
Predicted Functional Partners:
Cpap_3709
KEGG: cce:Ccel_0855 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.903
Cpap_3711
PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_0857 protein of unknown function DUF214.
 
     0.820
Cpap_3422
KEGG: dhd:Dhaf_3722 ABC transporter related; PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase.
  
 0.715
Cpap_1142
KEGG: ctc:CTC01419 transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  0.674
Cpap_0498
KEGG: cce:Ccel_0557 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  0.629
Cpap_3573
KEGG: fma:FMG_0914 multidrug ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  0.629
Cpap_3920
KEGG: cce:Ccel_1151 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  0.629
Cpap_3708
KEGG: cce:Ccel_0854 PfaD family protein; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
       0.620
Cpap_1061
KEGG: cce:Ccel_0466 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.605
Cpap_3580
KEGG: csc:Csac_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.603
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.