STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3717KEGG: cpy:Cphy_3935 cobyrinic acid ac-diamide synthase. (254 aa)    
Predicted Functional Partners:
Cpap_2088
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_0008 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.967
Cpap_2072
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_3483 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.920
Cpap_0883
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ere:EUBREC_3611 chromosome partitioning ParB family protein; SMART: ParB domain protein nuclease.
 
 
 0.782
Cpap_3716
KEGG: cce:Ccel_0862 beta-ketoacyl synthase; PFAM: KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding.
  
  
 0.716
Cpap_3715
KEGG: cce:Ccel_0861 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
       0.705
Cpap_3713
PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region.
       0.614
Cpap_3714
6-deoxyerythronolide-B synthase., Beta-ketoacyl-acyl-carrier-protein synthase I; KEGG: bay:RBAM_014370 MlnE; PFAM: Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
       0.614
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.604
Cpap_0847
Cell division protein FtsK/SpoIIIE; KEGG: mfl:Mfl100 DNA translocase (stage III sporulation protein E); PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
  
  
 0.586
Cpap_1580
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cce:Ccel_0601 cell divisionFtsK/SpoIIIE.
  
  
 0.549
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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