STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3722Hypothetical protein; KEGG: mif:Metin_0789 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (343 aa)    
Predicted Functional Partners:
Cpap_3721
PFAM: Polyprenyl synthetase; KEGG: ton:TON_0137 bifunctional short-chain isoprenyl diphosphate synthase.
 
  
 
0.894
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
 
 0.859
Cpap_3723
PFAM: Ubiquitin related modifier 1 family protein; KEGG: ttr:Tter_1313 UBA/ThiF-type NAD/FAD binding protein.
       0.773
Cpap_3724
KEGG: mba:Mbar_A0490 hypothetical protein.
       0.773
Cpap_3725
PFAM: Methyltransferase type 11; KEGG: tsi:TSIB_0930 putative methyltransferase.
  
 
 0.752
Cpap_1042
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 
 0.747
Cpap_3726
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: sti:Sthe_0801 UBA/ThiF-type NAD/FAD binding protein.
    
 0.673
Cpap_0394
PFAM: phosphoesterase PA-phosphatase related; KEGG: cce:Ccel_2878 hypothetical protein.
  
 0.657
Cpap_1855
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cce:Ccel_1525 heptaprenyl diphosphate synthase component I.
  
 
 0.656
Cpap_3879
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cce:Ccel_1115 heptaprenyl diphosphate synthase component I.
  
 
 0.656
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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