STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3781KEGG: cce:Ccel_1076 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (515 aa)    
Predicted Functional Partners:
Cpap_3783
PFAM: inner-membrane translocator; KEGG: cce:Ccel_1078 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
Cpap_3782
PFAM: inner-membrane translocator; KEGG: cce:Ccel_1077 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
Cpap_3780
PFAM: basic membrane lipoprotein; KEGG: cce:Ccel_1075 basic membrane lipoprotein.
 
 
 0.991
Cpap_3597
PFAM: inner-membrane translocator; KEGG: cce:Ccel_1409 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
Cpap_3596
PFAM: inner-membrane translocator; KEGG: cce:Ccel_1408 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
Cpap_3594
PFAM: basic membrane lipoprotein; KEGG: cce:Ccel_1406 basic membrane lipoprotein.
 
 
 0.954
Cpap_3595
Manually curated; PFAM: ABC transporter related; KEGG: cce:Ccel_1407 ABC transporter related; SMART: AAA ATPase.
  
  
 
0.847
Cpap_3785
PFAM: PfkB domain protein; KEGG: cce:Ccel_1080 PfkB domain protein.
       0.748
Cpap_3786
PFAM: purine or other phosphorylase family 1; KEGG: cce:Ccel_1081 purine or other phosphorylase family 1.
       0.743
Cpap_3784
PFAM: isochorismatase hydrolase; KEGG: cce:Ccel_1079 isochorismatase hydrolase.
       0.741
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.