STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3786PFAM: purine or other phosphorylase family 1; KEGG: cce:Ccel_1081 purine or other phosphorylase family 1. (252 aa)    
Predicted Functional Partners:
Cpap_1557
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
 0.968
Cpap_3150
TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: cce:Ccel_1750 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like.
  
 
 0.937
Cpap_3785
PFAM: PfkB domain protein; KEGG: cce:Ccel_1080 PfkB domain protein.
 
 
 0.908
Cpap_3787
PFAM: photosystem I assembly BtpA; KEGG: cce:Ccel_1082 photosystem I assembly BtpA.
 
     0.906
deoD
KEGG: cce:Ccel_3381 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1.
 
  
0.890
Cpap_3631
SMART: AAA ATPase; KEGG: cce:Ccel_1435 AAA ATPase.
    
 0.883
Cpap_3784
PFAM: isochorismatase hydrolase; KEGG: cce:Ccel_1079 isochorismatase hydrolase.
 
     0.867
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
     
 0.861
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
    
 0.834
Cpap_3783
PFAM: inner-membrane translocator; KEGG: cce:Ccel_1078 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.821
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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