STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3849PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (475 aa)    
Predicted Functional Partners:
Cpap_0273
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0753 glycoside hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.921
Cpap_1636
Hypothetical protein; Manually curated; KEGG: ttu:TERTU_4677 hypothetical protein.
  
 
  0.921
Cpap_1788
Mannan endo-1,4-beta-mannosidase; KEGG: cce:Ccel_1551 glycoside hydrolase family 26; PFAM: Dockerin type 1; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.921
Cpap_4240
PFAM: glycoside hydrolase family 9; KEGG: cce:Ccel_2226 glycoside hydrolase family 9.
 
 0.907
Cpap_3323
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_1249 glycoside hydrolase family 9.
  
 0.901
Cpap_0258
PFAM: Dockerin type 1; KEGG: cce:Ccel_0736 cellulosome protein dockerin type I.
  
 
  0.900
Cpap_0259
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0737 glycoside hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.900
Cpap_3312
PFAM: coagulation factor 5/8 type domain protein; Dockerin type 1; KEGG: cce:Ccel_1241 carbohydrate binding family 6.
  
 
  0.887
Cpap_3320
PFAM: Dockerin type 1; KEGG: cth:Cthe_0246 carbohydrate-binding family 6 protein.
 
 0.884
Cpap_0255
PFAM: cellulosome anchoring protein cohesin region; KEGG: cce:Ccel_0733 cellulosome anchoring protein cohesin region.
   
 0.876
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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