STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3866PFAM: Tail Collar domain protein; KEGG: cce:Ccel_1106 tail collar domain protein. (368 aa)    
Predicted Functional Partners:
Cpap_0717
PFAM: Tail Collar domain protein; KEGG: cce:Ccel_2493 tail collar domain protein.
  
     0.774
Cpap_0718
PFAM: Tail Collar domain protein; KEGG: cce:Ccel_2492 tail collar domain protein.
  
     0.774
Cpap_0719
PFAM: Tail Collar domain protein; KEGG: cce:Ccel_2492 tail collar domain protein.
  
     0.774
Cpap_0720
PFAM: Tail Collar domain protein; KEGG: cce:Ccel_2491 tail collar domain protein.
  
     0.774
Cpap_3865
PFAM: Tail Collar domain protein; KEGG: cce:Ccel_1105 tail collar domain protein.
 
    
0.694
Cpap_3867
KEGG: sbi:SORBI_06g001530 hypothetical protein.
       0.639
Cpap_1270
TIGRFAM: phage head-tail adaptor; KEGG: bcz:BCZK3421 prophage pi2 protein 36.
  
   0.549
Cpap_1272
TIGRFAM: phage major capsid protein, HK97 family; KEGG: afl:Aflv_0664 phage major capsid protein.
   
   0.547
Cpap_1274
Phage portal protein, HK97 family; KEGG: lin:lin2578 hypothetical protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
   
   0.547
Cpap_1531
KEGG: gka:GK0542 hypothetical protein.
   
   0.547
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.