STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3871PFAM: protein of unknown function DUF1646; KEGG: cce:Ccel_1109 protein of unknown function DUF1646. (351 aa)    
Predicted Functional Partners:
Cpap_3872
Hypothetical protein.
       0.714
Cpap_0832
KEGG: cce:Ccel_2212 hypothetical protein.
  
     0.624
Cpap_0986
Cellulase; KEGG: cce:Ccel_0428 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; S-layer domain-containing protein.
  
     0.597
Cpap_2062
KEGG: cce:Ccel_0393 hypothetical protein.
  
     0.546
Cpap_3337
Transcriptional regulator, LuxR family; KEGG: tex:Teth514_0348 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.506
Cpap_3679
PFAM: GCN5-related N-acetyltransferase; KEGG: cbk:CLL_A2294 GnaT-family acetyltransferase.
  
     0.470
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.