STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3929KEGG: cce:Ccel_1160 hypothetical protein. (243 aa)    
Predicted Functional Partners:
Cpap_3928
KEGG: cce:Ccel_1159 hypothetical protein.
    
  0.920
Cpap_3930
KEGG: cce:Ccel_1161 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.883
Cpap_0818
KEGG: gwc:GWCH70_2643 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.613
Cpap_1617
KEGG: ere:EUBREC_3044 YcbN; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.613
Cpap_3011
KEGG: bbe:BBR47_30950 probable ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.613
Cpap_0293
KEGG: dsy:DSY2147 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.587
Cpap_2983
KEGG: cce:Ccel_1918 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.587
Cpap_4116
KEGG: cce:Ccel_2323 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.587
Cpap_0288
KEGG: msi:Msm_1483 multidrug ABC transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 0.524
Cpap_0947
KEGG: cce:Ccel_2159 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 0.524
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.