STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3931TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain. (1175 aa)    
Predicted Functional Partners:
Cpap_0496
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: cce:Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding.
  
 0.999
Cpap_1375
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: cth:Cthe_2797 thiamine pyrophosphate enzyme-like TPP-binding.
  
0.999
Cpap_2096
KEGG: cce:Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain.
 
0.999
Cpap_0495
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cce:Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
0.998
Cpap_1376
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: cth:Cthe_2796 pyruvate ferredoxin oxidoreductase, alpha subunit.
 
0.998
Cpap_1377
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; KEGG: cth:Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit.
  
 0.998
Cpap_2389
KEGG: cce:Ccel_3366 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 0.998
Cpap_2811
PFAM: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: clj:CLJU_c30250 fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
  
 0.998
Cpap_3220
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cce:Ccel_1686 NADH ubiquinone oxidoreductase 20 kDa subunit.
  
 0.998
Cpap_0497
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_0556 pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.997
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.