STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_3979KEGG: tjr:TherJR_0447 hypothetical protein. (233 aa)    
Predicted Functional Partners:
Cpap_2062
KEGG: cce:Ccel_0393 hypothetical protein.
  
     0.506
Cpap_2415
KEGG: cce:Ccel_3341 hypothetical protein.
  
     0.505
Cpap_1859
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cce:Ccel_1522 single-stranded DNA-binding protein.
  
     0.472
Cpap_3482
PFAM: S-layer domain-containing protein; cytochrome P450; KEGG: pjd:Pjdr2_2684 S-layer domain protein.
  
     0.468
groL-2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.447
groS-2
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.427
Cpap_3432
KEGG: cce:Ccel_1326 hypothetical protein.
  
     0.404
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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