Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpap_0966 | Cpap_3584 | KEGG: pop:POPTR_1071364 hypothetical protein. | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | 0.422 |
Cpap_0966 | Cpap_4010 | KEGG: pop:POPTR_1071364 hypothetical protein. | PFAM: TniB family protein; KEGG: cth:Cthe_1115 Tn7-like transposition protein C. | 0.424 |
Cpap_0966 | Cpap_4011 | KEGG: pop:POPTR_1071364 hypothetical protein. | KEGG: cth:Cthe_1114 Tn7-like transposition protein D. | 0.434 |
Cpap_1568 | Cpap_3584 | KEGG: cth:Cthe_1254 hypothetical protein. | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | 0.453 |
Cpap_1568 | Cpap_4008 | KEGG: cth:Cthe_1254 hypothetical protein. | PFAM: TnsA endonuclease; KEGG: tit:Thit_1877 TnsA endonuclease. | 0.468 |
Cpap_1568 | Cpap_4009 | KEGG: cth:Cthe_1254 hypothetical protein. | PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding. | 0.522 |
Cpap_1568 | Cpap_4010 | KEGG: cth:Cthe_1254 hypothetical protein. | PFAM: TniB family protein; KEGG: cth:Cthe_1115 Tn7-like transposition protein C. | 0.551 |
Cpap_1568 | Cpap_4011 | KEGG: cth:Cthe_1254 hypothetical protein. | KEGG: cth:Cthe_1114 Tn7-like transposition protein D. | 0.550 |
Cpap_3584 | Cpap_0966 | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | KEGG: pop:POPTR_1071364 hypothetical protein. | 0.422 |
Cpap_3584 | Cpap_1568 | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | KEGG: cth:Cthe_1254 hypothetical protein. | 0.453 |
Cpap_3584 | Cpap_4009 | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding. | 0.472 |
Cpap_3584 | Cpap_4010 | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | PFAM: TniB family protein; KEGG: cth:Cthe_1115 Tn7-like transposition protein C. | 0.473 |
Cpap_3584 | Cpap_4011 | PFAM: FMN-binding domain protein; KEGG: cce:Ccel_1394 FMN-binding domain protein. | KEGG: cth:Cthe_1114 Tn7-like transposition protein D. | 0.447 |
Cpap_3981 | Cpap_4008 | KEGG: tmt:Tmath_1866 S23 ribosomal protein. | PFAM: TnsA endonuclease; KEGG: tit:Thit_1877 TnsA endonuclease. | 0.458 |
Cpap_3981 | Cpap_4009 | KEGG: tmt:Tmath_1866 S23 ribosomal protein. | PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding. | 0.455 |
Cpap_3981 | Cpap_4010 | KEGG: tmt:Tmath_1866 S23 ribosomal protein. | PFAM: TniB family protein; KEGG: cth:Cthe_1115 Tn7-like transposition protein C. | 0.470 |
Cpap_3981 | Cpap_4011 | KEGG: tmt:Tmath_1866 S23 ribosomal protein. | KEGG: cth:Cthe_1114 Tn7-like transposition protein D. | 0.446 |
Cpap_4007 | Cpap_4008 | KEGG: cim:CIMG_00961 hypothetical protein. | PFAM: TnsA endonuclease; KEGG: tit:Thit_1877 TnsA endonuclease. | 0.588 |
Cpap_4007 | Cpap_4009 | KEGG: cim:CIMG_00961 hypothetical protein. | PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding. | 0.588 |
Cpap_4007 | Cpap_4010 | KEGG: cim:CIMG_00961 hypothetical protein. | PFAM: TniB family protein; KEGG: cth:Cthe_1115 Tn7-like transposition protein C. | 0.587 |
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