Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpap_4027 | Cpap_4028 | PFAM: integrase family protein; KEGG: dra:DR_C0018 integrase/recombinase XerD, putative. | KEGG: gtn:GTNG_2068 hypothetical protein. | 0.697 |
Cpap_4027 | Cpap_4029 | PFAM: integrase family protein; KEGG: dra:DR_C0018 integrase/recombinase XerD, putative. | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | 0.528 |
Cpap_4028 | Cpap_4027 | KEGG: gtn:GTNG_2068 hypothetical protein. | PFAM: integrase family protein; KEGG: dra:DR_C0018 integrase/recombinase XerD, putative. | 0.697 |
Cpap_4028 | Cpap_4029 | KEGG: gtn:GTNG_2068 hypothetical protein. | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | 0.581 |
Cpap_4029 | Cpap_4027 | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | PFAM: integrase family protein; KEGG: dra:DR_C0018 integrase/recombinase XerD, putative. | 0.528 |
Cpap_4029 | Cpap_4028 | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | KEGG: gtn:GTNG_2068 hypothetical protein. | 0.581 |
Cpap_4029 | Cpap_4030 | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | KEGG: kla:KLLA0B10956g hypothetical protein. | 0.480 |
Cpap_4030 | Cpap_4029 | KEGG: kla:KLLA0B10956g hypothetical protein. | Hypothetical protein; KEGG: tet:TTHERM_00895800 Ubiquitin carboxyl-terminal hydrolase family protein. | 0.480 |