STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_4061Dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; Dak phosphatase; manually curated; KEGG: cbb:CLD_3590 dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; dihydroxyacetone kinase, L subunit. (548 aa)    
Predicted Functional Partners:
Cpap_4060
PFAM: iron-containing alcohol dehydrogenase; KEGG: cno:NT01CX_0287 glycerol dehydrogenase.
  
 
 0.961
Cpap_1717
KEGG: cce:Ccel_1638 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
 
 
0.895
Cpap_2880
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase.
 
  
 0.726
Cpap_0726
PFAM: 3-dehydroquinate synthase; KEGG: cce:Ccel_2486 3-dehydroquinate synthase.
  
 
 0.707
Cpap_4249
TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: cce:Ccel_2222 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.707
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cce:Ccel_2129 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.690
Cpap_0476
Transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; KEGG: bha:BH0780 transcriptional regulator.
  
  0.663
Cpap_2630
KEGG: cce:Ccel_2523 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
    
 
 0.582
Cpap_3075
Transcriptional regulator, LuxR family; Manually curated; PFAM: regulatory protein LuxR; KEGG: tex:Teth514_0348 regulatory protein, LuxR; SMART: regulatory protein LuxR.
    
 
 0.582
Cpap_3337
Transcriptional regulator, LuxR family; KEGG: tex:Teth514_0348 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
    
 
 0.582
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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