STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_4119Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; S-layer domain-containing protein; Carbohydrate-binding CenC domain protein; KEGG: cce:Ccel_2320 glycoside hydrolase family 10; SMART: glycoside hydrolase family 10. (1048 aa)    
Predicted Functional Partners:
Cpap_2220
Alpha-glucuronidase; KEGG: cce:Ccel_0141 glycosyl hydrolase 67 middle domain protein; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.770
Cpap_3332
PFAM: glycoside hydrolase family 43; KEGG: cce:Ccel_1257 glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.761
Cpap_2232
KEGG: cce:Ccel_0153 glycoside hydrolase family 10; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.752
Cpap_3847
KEGG: csc:Csac_0204 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.747
Cpap_1636
Hypothetical protein; Manually curated; KEGG: ttu:TERTU_4677 hypothetical protein.
  
     0.703
Cpap_0269
PFAM: glycoside hydrolase family 11; Dockerin type 1; KEGG: cce:Ccel_0750 glycoside hydrolase family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.698
Cpap_0589
Xylan 1,4-beta-xylosidase; KEGG: cce:Ccel_2614 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.695
Cpap_3305
Glycoside hydrolase family 43; KEGG: cce:Ccel_1233 carbohydrate binding family 6; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV.
 
  
 0.679
Cpap_2229
PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_0150 extracellular solute-binding protein family 1.
  
     0.676
Cpap_3401
PFAM: glycoside hydrolase family 8; Dockerin type 1; KEGG: cce:Ccel_1298 glycoside hydrolase family 8.
 
   
 0.646
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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