STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_4135PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cce:Ccel_2305 NADH dehydrogenase (ubiquinone) 24 kDa subunit. (157 aa)    
Predicted Functional Partners:
Cpap_4136
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; KEGG: cce:Ccel_2304 respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
 0.999
Cpap_4226
KEGG: cce:Ccel_2233 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain.
 0.999
Cpap_4137
KEGG: cce:Ccel_2303 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; iron hydrogenase small subunit; ferredoxin.
 0.998
Cpap_2520
KEGG: drm:Dred_3291 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain.
 0.997
Cpap_2811
PFAM: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: clj:CLJU_c30250 fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
 0.991
Cpap_0754
KEGG: tpt:Tpet_0696 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain.
 0.985
Cpap_0755
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; iron hydrogenase small subunit; ferredoxin; KEGG: cce:Ccel_2467 hydrogenase, Fe-only; SMART: iron hydrogenase small subunit.
 0.985
Cpap_4227
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; iron hydrogenase small subunit; ferredoxin; KEGG: cce:Ccel_2232 hydrogenase, Fe-only; SMART: iron hydrogenase small subunit.
 0.985
Cpap_2521
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: drm:Dred_3290 hydrogenases, Fe-only; SMART: iron hydrogenase small subunit.
 0.984
Cpap_2385
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: cce:Ccel_3370 respiratory-chain NADH dehydrogenase subunit 1.
  
 0.979
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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