STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_4176Hypothetical protein. (51 aa)    
Predicted Functional Partners:
Cpap_4177
KEGG: ere:EUBREC_1597 hypothetical protein.
       0.623
Cpap_4178
KEGG: cce:Ccel_2266 hypothetical protein.
       0.550
Cpap_4174
KEGG: cce:Ccel_2270 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: LytTr DNA-binding region; response regulator receiver.
       0.493
Cpap_4175
PFAM: ATP-binding region ATPase domain protein; KEGG: cce:Ccel_2269 signal transduction histidine kinase regulating citrate/malate metabolism.
       0.493
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.