STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_4253PFAM: Protein of unknown function DUF2229, CoA enzyme activase; 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: cce:Ccel_2220 hypothetical protein. (326 aa)    
Predicted Functional Partners:
Cpap_4255
KEGG: cce:Ccel_2218 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
     0.996
Cpap_2583
TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: dal:Dalk_0251 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
     0.969
Cpap_4254
KEGG: cce:Ccel_2219 hypothetical protein.
   
0.941
Cpap_2605
CoA-substrate-specific enzyme activase; KEGG: cbb:CLD_2999 2-hydroxyglutaryl-CoA dehydratase component A; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; Ribosomal protein L9-like.
 
     0.754
Cpap_4252
KEGG: cce:Ccel_2221 protein of unknown function DUF187; PFAM: protein of unknown function DUF187; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
       0.550
Cpap_3065
KEGG: cce:Ccel_1853 hypothetical protein.
  
     0.488
Cpap_4256
KEGG: cce:Ccel_2216 hypothetical protein.
       0.472
Cpap_2948
KEGG: cce:Ccel_1945 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type.
 
   
0.425
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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